Transcript: lnc-TFEC-2:12

Basic information

LNCipedia transcript ID: lnc-TFEC-2:12 
LNCipedia gene ID: lnc-TFEC-2
Location (hg38): chr7:116414230-116499514
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2933 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237813.3|ENCT00000416683.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.6495 non-coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TFEC-2:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TFEC-2:12
5.0 lnc-TFEC-2:12
5.1 lnc-TFEC-2:12
5.2 lnc-TFEC-2:12