Transcript: lnc-TGFBI-3:2

Basic information

LNCipedia transcript ID: lnc-TGFBI-3:2 
LNCipedia gene ID: lnc-TGFBI-3
Location (hg38): chr5:135637451-135638224
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 774 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT103919; FPKM1_group_26364_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.3064 non-coding 
CPAT coding probability 1.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TGFBI-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC25A48-6:1
4.0 lnc-SLC25A48-6:1
4.1 lnc-SLC25A48-3:7
5.0 lnc-SLC25A48-3:7
5.1 lnc-PDLIM4-78:1
5.2 lnc-TGFBI-3:2