Transcript: lnc-TGFBI-80:12

Basic information

LNCipedia transcript ID: lnc-TGFBI-80:12 
LNCipedia gene ID: lnc-TGFBI-80
Ensembl Gene ID: ENSG00000250378
Ensembl Transcript ID: ENST00000644259
Location (hg38): chr5:135826387-135827546
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1160 bp
Exons: 1
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000644259.1
Alternative gene names: ENSG00000250378.3; AC114296.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -93.0885 non-coding 
CPAT coding probability 0.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TGFBI-80:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PDLIM4-80:12
5.1 lnc-PDLIM4-80:12
5.2 lnc-TGFBI-80:12