Transcript: lnc-TGFBR2-4:1

Basic information

LNCipedia transcript ID: lnc-TGFBR2-4:1 
LNCipedia gene ID: lnc-TGFBR2-4
Location (hg38): chr3:30493919-30502172
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 500 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_2339_chr3:30535410-30543664_adrenal
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -176.1486 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TGFBR2-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TGFBR2-4:1
4.0 lnc-TGFBR2-4:1
4.1 lnc-TGFBR2-4:1
5.0 lnc-TGFBR2-4:1
5.1 lnc-STT3B-11:1
5.2 lnc-TGFBR2-4:1