Transcript: lnc-THBS1-6:1

Basic information

LNCipedia transcript ID: lnc-THBS1-6:1 
LNCipedia gene ID: lnc-THBS1-6
Location (hg38): chr15:39383841-39392637
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 542 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023358; NONHSAT041741
Alternative gene names: XLOC_011215; linc-THBS1-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -194.4309 non-coding 
CPAT coding probability 4.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-THBS1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C15orf54-2:1
3.1 lnc-C15orf54-2:1
4.0 lnc-C15orf54-2:1
4.1 lnc-C15orf54-2:1
5.0 lnc-C15orf54-2:1
5.1 lnc-TMEM62-93:1
5.2 lnc-THBS1-6:1