Transcript: lnc-THEMIS-2:2

Basic information

LNCipedia transcript ID: lnc-THEMIS-2:2 
LNCipedia gene ID: lnc-THEMIS-2
Location (hg38): chr6:128447398-128449301
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1904 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT114866; ENST00000450483.2
Alternative gene names: ENSG00000182404.6; RP1-86D1.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.2019 non-coding 
CPAT coding probability 2.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-THEMIS-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-THEMIS-2:2
4.0 lnc-THEMIS-2:2
4.1 lnc-THEMIS-2:2
5.0 lnc-THEMIS-2:2
5.1 lnc-HDDC2-34:2
5.2 lnc-THEMIS-2:2