Transcript: lnc-THOC3-2:11

Basic information

LNCipedia transcript ID: lnc-THOC3-2:11 
LNCipedia gene ID: lnc-THOC3-2
Location (hg38): chr5:176173185-176185176
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 901 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000248596.2|FTMT21700050538.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -72.1306 non-coding 
CPAT coding probability 8.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-THOC3-2:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-826N14.2.1-2:23
5.0 lnc-RP11-826N14.2.1-2:23
5.1 lnc-PDLIM7-50:11
5.2 lnc-THOC3-2:11