Transcript: lnc-THOC3-2:25

Basic information

LNCipedia transcript ID: lnc-THOC3-2:25 
LNCipedia gene ID: lnc-THOC3-2
Location (hg38): chr5:176143080-176147867
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1103 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT105302
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 70.1878 coding 
CPAT coding probability 18.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-THOC3-2:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-826N14.2.1-2:17
4.0 lnc-RP11-826N14.2.1-2:17
4.1 lnc-RP11-826N14.2.1-2:17
5.0 lnc-RP11-826N14.2.1-2:17
5.1 lnc-PDLIM7-50:25
5.2 lnc-THOC3-2:25