Transcript: lnc-THOC3-3:1

Basic information

LNCipedia transcript ID: lnc-THOC3-3:1 
LNCipedia gene ID: lnc-THOC3-3
RefSeq ID: NR_103794
Location (hg38): chr5:176049678-176062055
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1550 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_103794; NR_103794.1
Alternative gene names: LOC100996385


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 22.3993 non-coding 
CPAT coding probability 6.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-THOC3-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-826N14.2.1-3:1
4.0 lnc-RP11-826N14.2.1-3:1
4.1 lnc-RP11-826N14.2.1-3:1
5.0 lnc-RP11-826N14.2.1-3:1
5.1 lnc-PDLIM7-52:1
5.2 lnc-THOC3-3:1