Transcript: lnc-TIGD2-2:1

Basic information

LNCipedia transcript ID: lnc-TIGD2-2:1 
LNCipedia gene ID: lnc-TIGD2-2
Location (hg38): chr4:89111500-89112368
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 686 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000603357.1
Alternative gene names: ENSG00000271359.1; RP11-84C13.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -62.5203 non-coding 
CPAT coding probability 3.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TIGD2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TIGD2-2:1
4.0 lnc-TIGD2-2:1
4.1 lnc-TIGD2-2:1
5.0 lnc-TIGD2-2:1
5.1 lnc-HERC3-4:1
5.2 lnc-TIGD2-2:1