Transcript: lnc-TIGD2-2:8

Basic information

LNCipedia transcript ID: lnc-TIGD2-2:8 
LNCipedia gene ID: lnc-TIGD2-2
Location (hg38): chr4:89111569-89120068
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 2826 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271359.1|HBMT00001067973.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.3705 non-coding 
CPAT coding probability 1.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TIGD2-2:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TIGD2-2:8
5.0 lnc-TIGD2-2:8
5.1 lnc-HERC3-4:10
5.2 lnc-TIGD2-2:8