Transcript: lnc-TIGD2-7:1

Basic information

LNCipedia transcript ID: lnc-TIGD2-7:1 
LNCipedia gene ID: lnc-TIGD2-7
Location (hg38): chr4:89283937-89292653
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 306 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000069375.1|FTMT21500009808.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -256.821 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TIGD2-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TIGD2-7:1
5.0 lnc-TIGD2-7:1
5.1 lnc-HERC3-8:1
5.2 lnc-TIGD2-7:1