Transcript: lnc-TIMELESS-1:1

Basic information

LNCipedia transcript ID: lnc-TIMELESS-1:1 
LNCipedia gene ID: lnc-TIMELESS-1
Ensembl Gene ID: ENSG00000276272
Ensembl Transcript ID: ENST00000610448
Location (hg38): chr12:56411944-56413190
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1247 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000610448.1
Alternative gene names: ENSG00000276272.1; RP11-121C6.5; AC024884.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 31.6417 non-coding 
CPAT coding probability 52.26% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TIMELESS-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TIMELESS-1:1
4.1 lnc-TIMELESS-1:1
5.0 lnc-TIMELESS-1:1
5.1 lnc-PMEL-34:1
5.2 lnc-TIMELESS-1:1