Transcript: lnc-TIMM21-17:1

Basic information

LNCipedia transcript ID: lnc-TIMM21-17:1 
LNCipedia gene ID: lnc-TIMM21-17
Location (hg38): chr18:72819627-72819867
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 241 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: uc_438_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -408.7296 non-coding 
CPAT coding probability 0.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TIMM21-17:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TIMM21-17:1
4.0 lnc-TIMM21-17:1
4.1 lnc-TIMM21-17:1
5.0 lnc-TIMM21-17:1
5.1 lnc-KCNG2-75:1
5.2 lnc-TIMM21-17:1