Transcript: lnc-TIMP1-4:2

Basic information

LNCipedia transcript ID: lnc-TIMP1-4:2 
LNCipedia gene ID: lnc-TIMP1-4
Location (hg38): chrX:47659282-47665159
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5878 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267064.1|ENCT00000466883.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.7403 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TIMP1-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 UXT-AS1:9
5.0 UXT-AS1:9
5.1 lnc-CHST7-97:2
5.2 lnc-TIMP1-4:2