Transcript: lnc-TK2-2:5

Basic information

LNCipedia transcript ID: lnc-TK2-2:5 
LNCipedia gene ID: lnc-TK2-2
Location (hg38): chr16:66579983-66580718
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 557 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260650.1|ENST00000568430.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -38.4324 non-coding 
CPAT coding probability 1.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TK2-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TK2-2:5
5.0 lnc-TK2-2:5
5.1 lnc-PSMB10-37:1
5.2 lnc-TK2-2:5