Transcript: lnc-TK2-3:5

Basic information

LNCipedia transcript ID: lnc-TK2-3:5 
LNCipedia gene ID: lnc-TK2-3
Location (hg38): chr16:66364729-66366510
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 392 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000029625.1|FTMT26100014227.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -29.4304 non-coding 
CPAT coding probability 4.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TK2-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TK2-3:5
5.0 lnc-TK2-3:5
5.1 lnc-PSMB10-43:4
5.2 lnc-TK2-3:5