Transcript: lnc-TLE1-1:2

Basic information

LNCipedia transcript ID: lnc-TLE1-1:2 
LNCipedia gene ID: lnc-TLE1-1
Ensembl Gene ID: ENSG00000267559
Ensembl Transcript ID: ENST00000585776
Location (hg38): chr9:81930226-81977089
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2208 bp
Exons: 5
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000585776.1; ENST00000585776.5
Alternative gene names: ENSG00000267559.1; RP11-383M4.6; ENSG00000267559.5; AL158154.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.678 non-coding 
CPAT coding probability 10.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TLE1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM75B-1:2
4.0 lnc-FAM75B-1:2
4.1 lnc-FAM75B-1:2
5.0 lnc-FAM75B-1:2
5.1 lnc-SEMA4D-103:1
5.2 lnc-TLE1-1:2