Transcript: lnc-TLE1-1:3

Basic information

LNCipedia transcript ID: lnc-TLE1-1:3 
LNCipedia gene ID: lnc-TLE1-1
Ensembl Gene ID: ENSG00000267559
Ensembl Transcript ID: ENST00000592744
Location (hg38): chr9:81946438-81976806
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 567 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT132683; ENST00000592744.1
Alternative gene names: ENSG00000267559.1; RP11-383M4.6; ENSG00000267559.5; AL158154.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -43.2515 non-coding 
CPAT coding probability 0.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TLE1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM75B-1:3
4.0 lnc-FAM75B-1:3
4.1 lnc-FAM75B-1:3
5.0 lnc-FAM75B-1:3
5.1 lnc-SEMA4D-103:2
5.2 lnc-TLE1-1:3