Transcript: lnc-TLE3-6:11

Basic information

LNCipedia transcript ID: lnc-TLE3-6:11 
LNCipedia gene ID: lnc-TLE3-6
Location (hg38): chr15:69452821-69454086
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 907 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000501805
Alternative gene names: ENSG00000245184


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
AAGVNVEPFWPGLFAK 100% antisense-3
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.7243 non-coding 
CPAT coding probability 1.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TLE3-6:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TLE3-4:1
3.1 lnc-TLE3-8:1
4.0 lnc-TLE3-8:1
4.1 lnc-TLE3-6:11
5.0 lnc-TLE3-6:11
5.1 lnc-CLN6-13:11
5.2 lnc-TLE3-6:11