Transcript: lnc-TLR4-3:6

Basic information

LNCipedia transcript ID: lnc-TLR4-3:6 
LNCipedia gene ID: lnc-TLR4-3
Ensembl Gene ID: ENSG00000284977
Ensembl Transcript ID: ENST00000645182
Location (hg38): chr9:117759455-117780593
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3176 bp
Exons: 4
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000645182.1
Alternative gene names: ENSG00000284977.1; AL160272.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -205.9548 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TLR4-3:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-B3GNT10-15:5
5.1 lnc-B3GNT10-15:5
5.2 lnc-TLR4-3:6