Transcript: lnc-TLR4-9:1

Basic information

LNCipedia transcript ID: lnc-TLR4-9:1 
LNCipedia gene ID: lnc-TLR4-9
Location (hg38): chr9:118951106-118980346
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 418 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT134486; FPKM1_group_33800_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -258.6782 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TLR4-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-295D22.1.1-6:4
4.0 lnc-RP11-295D22.1.1-6:4
4.1 lnc-RP11-295D22.1.1-6:4
5.0 lnc-RP11-295D22.1.1-6:4
5.1 lnc-B3GNT10-12:1
5.2 lnc-TLR4-9:1