Transcript: lnc-TLR4-9:4

Basic information

LNCipedia transcript ID: lnc-TLR4-9:4 
LNCipedia gene ID: lnc-TLR4-9
Location (hg38): chr9:118976295-118980423
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 460 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016146; NONHSAT134489
Alternative gene names: XLOC_007542; linc-CEP110-9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -258.6782 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TLR4-9:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-295D22.1.1-5:3
3.1 lnc-RP11-295D22.1.1-6:3
4.0 lnc-RP11-295D22.1.1-6:3
4.1 lnc-RP11-295D22.1.1-6:3
5.0 lnc-RP11-295D22.1.1-6:3
5.1 lnc-B3GNT10-12:4
5.2 lnc-TLR4-9:4