Transcript: lnc-TM2D3-2:3

Basic information

LNCipedia transcript ID: lnc-TM2D3-2:3 
LNCipedia gene ID: lnc-TM2D3-2
Location (hg38): chr15:101500322-101501768
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 734 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000026149.1|FTMT25700000448.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -83.9424 non-coding 
CPAT coding probability 2.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TM2D3-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TM2D3-2:3
5.0 lnc-TM2D3-2:3
5.1 lnc-CIB1-118:2
5.2 lnc-TM2D3-2:3