Transcript: lnc-TMC6-3:1

Basic information

LNCipedia transcript ID: lnc-TMC6-3:1 
LNCipedia gene ID: lnc-TMC6-3
Location (hg38): chr17:77468561-77472770
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1733 bp
Exons: 3
Sources: Biogazelle lncRNA chip; NONCODE v4
Alternative transcript names: ENST00000508979; NONHSAT056152
Alternative gene names: ENSG00000250022


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.5879 non-coding 
CPAT coding probability 5.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMC6-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC015804.1-3:1
3.1 lnc-AC015804.1-3:1
4.0 lnc-AC015804.1-3:1
4.1 lnc-AC015804.1-3:1
5.0 lnc-AC015804.1-3:1
5.1 lnc-ST6GALNAC2-26:1
5.2 lnc-TMC6-3:1