Transcript: lnc-TMC6-8:1

Basic information

LNCipedia transcript ID: lnc-TMC6-8:1 
LNCipedia gene ID: lnc-TMC6-8
Ensembl Gene ID: ENSG00000267466
Ensembl Transcript ID: ENST00000585798
Location (hg38): chr17:77563368-77568695
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1767 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT056167; ENST00000585798.1
Alternative gene names: ENSG00000267466.1; RP11-13K12.5; AC021683.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.4734 non-coding 
CPAT coding probability 82.33% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMC6-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC015804.1-8:1
4.0 lnc-AC015804.1-8:1
4.1 lnc-AC015804.1-8:1
5.0 lnc-AC015804.1-8:1
5.1 lnc-SOCS3-27:1
5.2 lnc-TMC6-8:1