Transcript: lnc-TMC7-6:5

Basic information

LNCipedia transcript ID: lnc-TMC7-6:5 
LNCipedia gene ID: lnc-TMC7-6
Location (hg38): chr16:18571177-18573494
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 753 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA493:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 108.3512 coding 
CPAT coding probability 43.35% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMC7-6:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TMC7-6:5
4.1 lnc-TMC7-6:5
5.0 lnc-TMC7-6:5
5.1 lnc-ITPRIPL2-9:2
5.2 lnc-TMC7-6:5