Transcript: lnc-TMED1-2:1

Basic information

LNCipedia transcript ID: lnc-TMED1-2:1 
LNCipedia gene ID: lnc-TMED1-2
Location (hg38): chr19:10927598-10928547
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 530 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT061108
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -188.2126 non-coding 
CPAT coding probability 91.29% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMED1-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMED1-2:1
4.0 lnc-TMED1-2:1
4.1 lnc-TMED1-2:1
5.0 lnc-TMED1-2:1
5.1 lnc-ZNF823-29:1
5.2 lnc-TMED1-2:1