Transcript: lnc-TMEM105-2:18

Basic information

LNCipedia transcript ID: lnc-TMEM105-2:18 
LNCipedia gene ID: lnc-TMEM105-2
Location (hg38): chr17:81379134-81379835
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 702 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT056476; ENST00000596728.1
Alternative gene names: ENSG00000262223.2; RP11-1055B8.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.565 non-coding 
CPAT coding probability 25.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM105-2:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM105-2:18
4.0 lnc-TMEM105-2:18
4.1 lnc-TMEM105-2:18
5.0 lnc-TMEM105-2:18
5.1 lnc-NPLOC4-13:34
5.2 lnc-TMEM105-2:18