Transcript: lnc-TMEM105-2:23

Basic information

LNCipedia transcript ID: lnc-TMEM105-2:23 
LNCipedia gene ID: lnc-TMEM105-2
Location (hg38): chr17:81386816-81393998
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6617 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000262877.3|HBMT00000639152.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.4133 non-coding 
CPAT coding probability 95.61% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMEM105-2:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM105-2:23
5.0 lnc-TMEM105-2:23
5.1 lnc-NPLOC4-13:6
5.2 lnc-TMEM105-2:23