Transcript: lnc-TMEM105-2:29

Basic information

LNCipedia transcript ID: lnc-TMEM105-2:29 
LNCipedia gene ID: lnc-TMEM105-2
Location (hg38): chr17:81388066-81393595
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5530 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1655:2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.4133 non-coding 
CPAT coding probability 59.06% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMEM105-2:29 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TMEM105-3:6
4.1 lnc-TMEM105-2:29
5.0 lnc-TMEM105-2:29
5.1 lnc-NPLOC4-13:10
5.2 lnc-TMEM105-2:29