Transcript: lnc-TMEM105-2:33

Basic information

LNCipedia transcript ID: lnc-TMEM105-2:33 
LNCipedia gene ID: lnc-TMEM105-2
Ensembl Gene ID: ENSG00000262877
Ensembl Transcript ID: ENST00000571724
Location (hg38): chr17:81388126-81390256
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1565 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000571724.3
Alternative gene names: ENSG00000262877.4; RP11-1055B8.4; AC110285.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -167.4232 non-coding 
CPAT coding probability 29.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM105-2:33 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TMEM105-3:8
4.1 lnc-TMEM105-2:33
5.0 lnc-TMEM105-2:33
5.1 lnc-NPLOC4-13:14
5.2 lnc-TMEM105-2:33