Transcript: lnc-TMEM105-2:34

Basic information

LNCipedia transcript ID: lnc-TMEM105-2:34 
LNCipedia gene ID: lnc-TMEM105-2
Ensembl Gene ID: ENSG00000262877
Ensembl Transcript ID: ENST00000608155
Location (hg38): chr17:81388131-81390124
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 414 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000608155.1
Alternative gene names: ENSG00000262877.3; RP11-1055B8.4; ENSG00000262877.4; AC110285.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -534.0206 non-coding 
CPAT coding probability 12.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM105-2:34 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM105-3:5
4.0 lnc-TMEM105-3:5
4.1 lnc-TMEM105-2:34
5.0 lnc-TMEM105-2:34
5.1 lnc-NPLOC4-13:15
5.2 lnc-TMEM105-2:34