Transcript: lnc-TMEM105-2:4

Basic information

LNCipedia transcript ID: lnc-TMEM105-2:4 
LNCipedia gene ID: lnc-TMEM105-2
Location (hg38): chr17:81384100-81385450
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1226 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026174; NONHSAT056482
Alternative gene names: XLOC_012586; linc-TMEM105-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.179 non-coding 
CPAT coding probability 17.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM105-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM105-2:4
3.1 lnc-TMEM105-2:4
4.0 lnc-TMEM105-2:4
4.1 lnc-TMEM105-2:4
5.0 lnc-TMEM105-2:4
5.1 lnc-NPLOC4-13:20
5.2 lnc-TMEM105-2:4