Transcript: lnc-TMEM114-3:1

Basic information

LNCipedia transcript ID: lnc-TMEM114-3:1 
LNCipedia gene ID: lnc-TMEM114-3
Ensembl Gene ID: ENSG00000260289
Ensembl Transcript ID: ENST00000567103
Location (hg38): chr16:7888489-7894395
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 445 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000567103.1; CTD-2535I10.1-001; OTTHUMT00000433117.1; NONHSAT140379
Alternative gene names: ENSG00000260289.1; CTD-2535I10.1; OTTHUMG00000176683.1; AC093515.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -408.2875 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM114-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM114-3:1
4.0 lnc-TMEM114-3:1
4.1 lnc-TMEM114-3:1
5.0 lnc-TMEM114-3:1
5.1 lnc-SEPT12-61:1
5.2 lnc-TMEM114-3:1