Transcript: lnc-TMEM126B-1:1

Basic information

LNCipedia transcript ID: lnc-TMEM126B-1:1 
LNCipedia gene ID: lnc-TMEM126B-1
Ensembl Gene ID: ENSG00000255555
Ensembl Transcript ID: ENST00000532123
Location (hg38): chr11:84936689-84955705
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 419 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000532123.1; AP000857.3-001; OTTHUMT00000393477.1; NONHSAT023430
Alternative gene names: ENSG00000255555.1; AP000857.3; OTTHUMG00000167150.1; AP000857.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -282.2323 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM126B-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM126B-1:1
4.0 lnc-TMEM126B-1:1
4.1 lnc-TMEM126B-1:1
5.0 lnc-TMEM126B-1:1
5.1 lnc-DDIAS-22:1
5.2 lnc-TMEM126B-1:1