Transcript: lnc-TMEM132B-2:4

Basic information

LNCipedia transcript ID: lnc-TMEM132B-2:4 
LNCipedia gene ID: lnc-TMEM132B-2
Location (hg38): chr12:126030623-126043458
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 849 bp
Exons: 5
Sources: Broad Institute
Alternative transcript names: TCONS_00020620
Alternative gene names: XLOC_009934; linc-TMEM132C-15


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.7548 non-coding 
CPAT coding probability 35.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM132B-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM132B-2:4
3.1 lnc-TMEM132B-2:4
4.0 lnc-TMEM132B-2:4
4.1 lnc-TMEM132B-2:4
5.0 lnc-TMEM132B-2:4
5.1 lnc-RFLNA-26:8
5.2 lnc-TMEM132B-2:4