Transcript: lnc-TMEM138-10:2

Basic information

LNCipedia transcript ID: lnc-TMEM138-10:2 
LNCipedia gene ID: lnc-TMEM138-10
Location (hg38): chr11:61371271-61372211
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 867 bp
Exons: 2
Sources: Hangauer et al., 2013
Alternative transcript names: FPKM1_group_4704_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.9493 non-coding 
CPAT coding probability 0.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM138-10:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM138-1:2
4.0 lnc-TMEM138-10:2
4.1 lnc-TMEM138-10:2
5.0 lnc-TMEM138-10:2
5.1 lnc-MS4A18-23:2
5.2 lnc-TMEM138-10:2