Transcript: lnc-TMEM14A-1:3

Basic information

LNCipedia transcript ID: lnc-TMEM14A-1:3 
LNCipedia gene ID: lnc-TMEM14A-1
RefSeq ID: NR_024403
Location (hg38): chr6:52664401-52669153
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3784 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT113138; NR_024403; NR_024403.1
Alternative gene names: LOC730101


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.1507 non-coding 
CPAT coding probability 1.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM14A-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM14A-1:3
4.0 lnc-TMEM14A-1:3
4.1 lnc-TMEM14A-1:3
5.0 lnc-TMEM14A-1:3
5.1 lnc-EFHC1-6:2
5.2 lnc-TMEM14A-1:3