Transcript: lnc-TMEM151A-4:1

Basic information

LNCipedia transcript ID: lnc-TMEM151A-4:1 
LNCipedia gene ID: lnc-TMEM151A-4
Ensembl Gene ID: ENSG00000255468
Ensembl Transcript ID: ENST00000580881
Location (hg38): chr11:66348215-66364804
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 762 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT022292; ENST00000580881.1
Alternative gene names: ENSG00000255468.6; RP11-867G23.8; AP001107.9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.1096 non-coding 
CPAT coding probability 3.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM151A-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-867G23.8.1-3:1
4.0 lnc-RP11-867G23.8.1-3:1
4.1 lnc-RP11-867G23.8.1-3:1
5.0 lnc-RP11-867G23.8.1-3:1
5.1 lnc-C11orf80-27:1
5.2 lnc-TMEM151A-4:1