Transcript: lnc-TMEM161B-9:3

Basic information

LNCipedia transcript ID: lnc-TMEM161B-9:3 
LNCipedia gene ID: lnc-TMEM161B-9
Location (hg38): chr5:88220615-88268847
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 689 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT102605
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 461.8837 coding 
CPAT coding probability 18.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMEM161B-9:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MEF2C-9:3
4.0 lnc-TMEM161B-9:3
4.1 lnc-TMEM161B-9:3
5.0 lnc-TMEM161B-9:3
5.1 lnc-ANKRD34B-151:2
5.2 lnc-TMEM161B-9:3