Transcript: lnc-TMEM167B-4:3

Basic information

LNCipedia transcript ID: lnc-TMEM167B-4:3 
LNCipedia gene ID: lnc-TMEM167B-4
Location (hg38): chr1:109076112-109077789
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1678 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000012065.1|HBMT00000023673.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.0689 non-coding 
CPAT coding probability 5.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM167B-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM167B-4:3
5.0 lnc-TMEM167B-4:3
5.1 lnc-GSTM5-20:3
5.2 lnc-TMEM167B-4:3