Transcript: lnc-TMEM173-3:7

Basic information

LNCipedia transcript ID: lnc-TMEM173-3:7 
LNCipedia gene ID: lnc-TMEM173-3
Location (hg38): chr5:139638170-139642263
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 812 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT104117
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -97.1672 non-coding 
CPAT coding probability 1.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM173-3:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM173-2:1
4.0 lnc-TMEM173-4:1
4.1 lnc-TMEM173-3:7
5.0 lnc-TMEM173-3:7
5.1 lnc-DND1-35:7
5.2 lnc-TMEM173-3:7