Transcript: lnc-TMEM178A-1:1

Basic information

LNCipedia transcript ID: lnc-TMEM178A-1:1 
LNCipedia gene ID: lnc-TMEM178A-1
Location (hg38): chr2:39290866-39488051
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4894 bp
Exons: 12
Sources: Nielsen et al.,2014
Alternative transcript names: l_1814_chr2:39518006-39558253_76bGuttman_hLF
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.3247 non-coding 
CPAT coding probability 5.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM178A-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM178-4:1
4.0 lnc-TMEM178-4:1
4.1 lnc-TMEM178-1:25
5.0 lnc-TMEM178-1:25
5.1 lnc-RASGRP3-51:1
5.2 lnc-TMEM178A-1:1