Transcript: lnc-TMEM178A-1:28

Basic information

LNCipedia transcript ID: lnc-TMEM178A-1:28 
LNCipedia gene ID: lnc-TMEM178A-1
Location (hg38): chr2:39486321-39646784
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 548 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231312.2|HBMT00000763810.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -147.8685 non-coding 
CPAT coding probability 6.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM178A-1:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM178-1:38
5.0 lnc-TMEM178-1:38
5.1 lnc-RASGRP3-51:28
5.2 lnc-TMEM178A-1:28