Transcript: lnc-TMEM178A-1:36

Basic information

LNCipedia transcript ID: lnc-TMEM178A-1:36 
LNCipedia gene ID: lnc-TMEM178A-1
Location (hg38): chr2:39601520-39619403
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2353 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT070254; FPKM1_group_15896_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -53.6481 non-coding 
CPAT coding probability 1.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM178A-1:36 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM178-1:22
4.0 lnc-TMEM178-1:22
4.1 lnc-TMEM178-1:22
5.0 lnc-TMEM178-1:22
5.1 lnc-RASGRP3-51:36
5.2 lnc-TMEM178A-1:36