Transcript: lnc-TMEM178A-7:2

Basic information

LNCipedia transcript ID: lnc-TMEM178A-7:2 
LNCipedia gene ID: lnc-TMEM178A-7
Location (hg38): chr2:40608125-40611323
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 290 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1815_chr2:40835264-40838463_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.4764 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM178A-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM178-7:2
4.0 lnc-TMEM178-7:2
4.1 lnc-TMEM178-7:2
5.0 lnc-TMEM178-7:2
5.1 lnc-EPAS1-57:2
5.2 lnc-TMEM178A-7:2