Transcript: lnc-TMEM179B-5:1

Basic information

LNCipedia transcript ID: lnc-TMEM179B-5:1 
LNCipedia gene ID: lnc-TMEM179B-5
Location (hg38): chr11:62805615-62805996
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 382 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000002531.1|FTMT24400002868.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -293.6638 non-coding 
CPAT coding probability 1.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM179B-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM179B-5:1
5.0 lnc-TMEM179B-5:1
5.1 lnc-TMEM179B-5:1
5.2 lnc-TMEM179B-5:1