Transcript: lnc-TMEM18-6:2

Basic information

LNCipedia transcript ID: lnc-TMEM18-6:2 
LNCipedia gene ID: lnc-TMEM18-6
Location (hg38): chr2:747857-748397
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 374 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005058; NONHSAT068611
Alternative gene names: XLOC_001935; linc-TMEM18-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.5507 non-coding 
CPAT coding probability 0.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM18-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM18-6:2
3.1 lnc-TMEM18-6:2
4.0 lnc-TMEM18-6:2
4.1 lnc-TMEM18-6:2
5.0 lnc-TMEM18-6:2
5.1 lnc-RAD51AP2-220:2
5.2 lnc-TMEM18-6:2