Transcript: lnc-TMEM18-6:4

Basic information

LNCipedia transcript ID: lnc-TMEM18-6:4 
LNCipedia gene ID: lnc-TMEM18-6
Location (hg38): chr2:747658-748017
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 237 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005056; NONHSAT068609
Alternative gene names: XLOC_001935; linc-TMEM18-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.546 non-coding 
CPAT coding probability 2.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM18-6:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM18-6:4
3.1 lnc-TMEM18-6:4
4.0 lnc-TMEM18-6:4
4.1 lnc-TMEM18-6:4
5.0 lnc-TMEM18-6:4
5.1 lnc-RAD51AP2-220:5
5.2 lnc-TMEM18-6:4